HL_6WQN_055
3D structure
- PDB id
- 6WQN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGUUGGAAAUC
- Length
- 11 nucleotides
- Bulged bases
- 6WQN|1|1|U|2332, 6WQN|1|1|U|2333, 6WQN|1|1|G|2334, 6WQN|1|1|G|2335, 6WQN|1|1|A|2336, 6WQN|1|1|A|2337
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WQN_055 not in the Motif Atlas
- Geometric match to HL_5J7L_143
- Geometric discrepancy: 0.2683
- The information below is about HL_5J7L_143
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
6WQN|1|1|G|2330
6WQN|1|1|G|2331
6WQN|1|1|U|2332
6WQN|1|1|U|2333
6WQN|1|1|G|2334
6WQN|1|1|G|2335
6WQN|1|1|A|2336
6WQN|1|1|A|2337
6WQN|1|1|A|2338
6WQN|1|1|U|2339
6WQN|1|1|C|2340
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 2
- 5S ribosomal RNA; 5S rRNA
Coloring options: