HL_6WRS_013

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

6WRS|1|1|G|457

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRS_013 not in the Motif Atlas

Homologous match to HL_5J7L_146

Geometric discrepancy: 0.1312

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6WRS|1|1|G|456
6WRS|1|1|G|457
6WRS|1|1|A|458
6WRS|1|1|C|459
6WRS|1|1|C|460
6WRS|1|1|A|461
6WRS|1|1|U|462
6WRS|1|1|C|463

Current chains

Chain 1

23S rRNA

Nearby chains