HL_6WRS_038

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

6WRS|1|1|A|1658, 6WRS|1|1|A|1660, 6WRS|1|1|A|1662

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRS_038 not in the Motif Atlas

Homologous match to HL_4WF9_038

Geometric discrepancy: 0.1264

The information below is about HL_4WF9_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

6WRS|1|1|C|1656
6WRS|1|1|G|1657
6WRS|1|1|A|1658
6WRS|1|1|C|1659
6WRS|1|1|A|1660
6WRS|1|1|C|1661
6WRS|1|1|A|1662
6WRS|1|1|G|1663

Current chains

Chain 1

23S rRNA

Nearby chains

Chain E

uL22

Chain P

50S ribosomal protein L34