HL_6WRS_052

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUUGGAAAUC

Length

11 nucleotides

Bulged bases

6WRS|1|1|G|2334, 6WRS|1|1|A|2338

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRS_052 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3735

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

6WRS|1|1|G|2330
6WRS|1|1|G|2331
6WRS|1|1|U|2332
6WRS|1|1|U|2333
6WRS|1|1|G|2334
6WRS|1|1|G|2335
6WRS|1|1|A|2336
6WRS|1|1|A|2337
6WRS|1|1|A|2338
6WRS|1|1|U|2339
6WRS|1|1|C|2340

Current chains

Chain 1

23S rRNA

Nearby chains