HL_6WRU_014

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

6WRU|1|1|G|457

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRU_014 not in the Motif Atlas

Homologous match to HL_5J7L_146

Geometric discrepancy: 0.1094

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6WRU|1|1|G|456
6WRU|1|1|G|457
6WRU|1|1|A|458
6WRU|1|1|C|459
6WRU|1|1|C|460
6WRU|1|1|A|461
6WRU|1|1|U|462
6WRU|1|1|C|463

Current chains

Chain 1

23S rRNA

Nearby chains