HL_6WRU_017

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGUUAAUG

Length

8 nucleotides

Bulged bases

6WRU|1|1|U|590, 6WRU|1|1|U|593

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRU_017 not in the Motif Atlas

Homologous match to HL_4WF9_017

Geometric discrepancy: 0.1698

The information below is about HL_4WF9_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50318.1

Basepair signature

cWW-cSH-F-F

Number of instances in this motif group

1

Unit IDs

6WRU|1|1|C|587
6WRU|1|1|G|588
6WRU|1|1|U|589
6WRU|1|1|U|590
6WRU|1|1|A|591
6WRU|1|1|A|592
6WRU|1|1|U|593
6WRU|1|1|G|594

Current chains

Chain 1

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L21

Chain V

50S ribosomal protein L13