HL_6WRU_035

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

6WRU|1|1|U|1433, 6WRU|1|1|U|1434

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRU_035 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.158

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

6WRU|1|1|G|1426
6WRU|1|1|U|1427
6WRU|1|1|U|1428
6WRU|1|1|G|1429
6WRU|1|1|A|1430
6WRU|1|1|U|1431
6WRU|1|1|A|1432
6WRU|1|1|U|1433
6WRU|1|1|U|1434
6WRU|1|1|C|1435

Current chains

Chain 1

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L23