HL_6WYV_027

3D structure

PDB id

6WYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compounds 47 and VS1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WYV_027 not in the Motif Atlas

Homologous match to HL_5J7L_160

Geometric discrepancy: 0.1255

The information below is about HL_5J7L_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6WYV|1|I|G|978
6WYV|1|I|A|979
6WYV|1|I|A|980
6WYV|1|I|A|981
6WYV|1|I|C|982
6WYV|1|I|A|983
6WYV|1|I|A|984
6WYV|1|I|C|985

Current chains

Chain I

23S ribosomal RNA

Nearby chains