HL_6WYV_054

3D structure

PDB id

6WYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compounds 47 and VS1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

6WYV|1|I|A|2311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WYV_054 not in the Motif Atlas

Homologous match to HL_7RQB_055

Geometric discrepancy: 0.343

The information below is about HL_7RQB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.3

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6WYV|1|I|G|2303
6WYV|1|I|G|2304
6WYV|1|I|U|2305
6WYV|1|I|C|2306
6WYV|1|I|G|2307
6WYV|1|I|G|2308
6WYV|1|I|A|2309
6WYV|1|I|C|2310
6WYV|1|I|A|2311
6WYV|1|I|U|2312
6WYV|1|I|C|2313

Current chains

Chain I

23S ribosomal RNA

Nearby chains