HL_6X6T_109

3D structure

PDB id

6X6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGACCUUCGGGC

Length

12 nucleotides

Bulged bases

6X6T|1|D|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6X6T|1|D|G|203
6X6T|1|D|G|204
6X6T|1|D|A|205
6X6T|1|D|C|206
6X6T|1|D|C|207
6X6T|1|D|U|208
6X6T|1|D|U|209
6X6T|1|D|C|210
6X6T|1|D|G|211
6X6T|1|D|G|212
6X6T|1|D|G|213
6X6T|1|D|C|214

Current chains

Chain D

16S rRNA

Nearby chains