HL_6XHV_120

3D structure

PDB id

6XHV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GGCUUGUCC

Length

9 nucleotides

Bulged bases

6XHV|1|2A|U|271|||K, 6XHV|1|2A|U|271|||N

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHV|1|2A|G|271|||H
6XHV|1|2A|G|271|||I
6XHV|1|2A|C|271|||J
6XHV|1|2A|U|271|||K
6XHV|1|2A|U|271|||L
6XHV|1|2A|G|271|||M
6XHV|1|2A|U|271|||N
6XHV|1|2A|C|271|||O
6XHV|1|2A|C|271|||P

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 21

50S ribosomal protein L28

Chain 2I

50S ribosomal protein L9