HL_6XHW_028

3D structure

PDB id

6XHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GUGGCUUAGAAGCAGCCAUC

Length

20 nucleotides

Bulged bases

6XHW|1|1A|A|1067, 6XHW|1|1A|A|1070, 6XHW|1|1A|U|1078

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHW|1|1A|G|1059
6XHW|1|1A|U|1060
6XHW|1|1A|G|1062
6XHW|1|1A|G|1063
6XHW|1|1A|C|1064
6XHW|1|1A|U|1065
6XHW|1|1A|U|1066
6XHW|1|1A|A|1067
6XHW|1|1A|G|1068
6XHW|1|1A|A|1069
6XHW|1|1A|A|1070
6XHW|1|1A|G|1071
6XHW|1|1A|C|1072
6XHW|1|1A|A|1073
6XHW|1|1A|G|1074
6XHW|1|1A|C|1075
6XHW|1|1A|C|1076
6XHW|1|1A|A|1077
6XHW|1|1A|U|1078
6XHW|1|1A|C|1079

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains