HL_6XHW_232

3D structure

PDB id

6XHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GCUAGGGGGCCCACCAGCCUACCAAAC

Length

27 nucleotides

Bulged bases

6XHW|1|2A|G|892, 6XHW|1|2A|C|893, 6XHW|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHW|1|2A|G|875
6XHW|1|2A|C|876
6XHW|1|2A|U|877
6XHW|1|2A|A|878
6XHW|1|2A|G|879
6XHW|1|2A|G|880
6XHW|1|2A|G|881
6XHW|1|2A|G|882
6XHW|1|2A|G|883
6XHW|1|2A|C|884
6XHW|1|2A|C|885
6XHW|1|2A|C|886
6XHW|1|2A|A|887
6XHW|1|2A|C|888
6XHW|1|2A|C|889
6XHW|1|2A|A|890
6XHW|1|2A|G|892
6XHW|1|2A|C|893
6XHW|1|2A|C|894
6XHW|1|2A|U|895
6XHW|1|2A|A|896
6XHW|1|2A|C|897
6XHW|1|2A|C|898
6XHW|1|2A|A|899
6XHW|1|2A|A|900
6XHW|1|2A|A|901
6XHW|1|2A|C|902

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25

Chain 2a

Small subunit ribosomal RNA; SSU rRNA

Chain 2m

30S ribosomal protein S13

Chain 2w

Transfer RNA; tRNA