HL_6XHY_138

3D structure

PDB id

6XHY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GCUAGGGGGCCCACCAGCCUACCAAAC

Length

27 nucleotides

Bulged bases

6XHY|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHY|1|2A|G|875
6XHY|1|2A|C|876
6XHY|1|2A|U|877
6XHY|1|2A|A|878
6XHY|1|2A|G|879
6XHY|1|2A|G|880
6XHY|1|2A|G|881
6XHY|1|2A|G|882
6XHY|1|2A|G|883
6XHY|1|2A|C|884
6XHY|1|2A|C|885
6XHY|1|2A|C|886
6XHY|1|2A|A|887
6XHY|1|2A|C|888
6XHY|1|2A|C|889
6XHY|1|2A|A|890
6XHY|1|2A|G|892
6XHY|1|2A|C|893
6XHY|1|2A|C|894
6XHY|1|2A|U|895
6XHY|1|2A|A|896
6XHY|1|2A|C|897
6XHY|1|2A|C|898
6XHY|1|2A|A|899
6XHY|1|2A|A|900
6XHY|1|2A|A|901
6XHY|1|2A|C|902

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25

Chain 2m

30S ribosomal protein S13

Chain 2w

Transfer RNA; tRNA