HL_6XIJ_109

3D structure

PDB id

6XIJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex A (TTC-A) containing an 24 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

8 Å

Loop

Sequence

GGACCUUCGGGC

Length

12 nucleotides

Bulged bases

6XIJ|1|D|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIJ|1|D|G|203
6XIJ|1|D|G|204
6XIJ|1|D|A|205
6XIJ|1|D|C|206
6XIJ|1|D|C|207
6XIJ|1|D|U|208
6XIJ|1|D|U|209
6XIJ|1|D|C|210
6XIJ|1|D|G|211
6XIJ|1|D|G|212
6XIJ|1|D|G|213
6XIJ|1|D|C|214

Current chains

Chain D

16S rRNA

Nearby chains