HL_6XJQ_002
3D structure
- PDB id
- 6XJQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a self-alkylating ribozyme - alkylated form with biotinylated epoxide substrate
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.708 Å
Loop
- Sequence
- CUUGCCCGUUAUCG
- Length
- 14 nucleotides
- Bulged bases
- 6XJQ|1|B|U|24, 6XJQ|1|B|U|31, 6XJQ|1|B|U|32, 6XJQ|1|B|A|33
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XJQ|1|B|C|23
6XJQ|1|B|U|24
6XJQ|1|B|U|25
6XJQ|1|B|G|26
6XJQ|1|B|C|27
6XJQ|1|B|C|28
6XJQ|1|B|C|29
6XJQ|1|B|G|30
6XJQ|1|B|U|31
6XJQ|1|B|U|32
6XJQ|1|B|A|33
6XJQ|1|B|U|34
6XJQ|1|B|C|35
6XJQ|1|B|G|36
Current chains
- Chain B
- Self-alkylating ribozyme (58-MER)
Nearby chains
- Chain A
- Self-alkylating ribozyme (58-MER)
- Chain C
- Fab HAVx Heavy Chain
- Chain D
- Fab HAVx Light Chain
- Chain H
- Fab HAVx Heavy Chain
- Chain L
- Fab HAVx Light Chain
Coloring options: