HL_6XQD_026
3D structure
- PDB id
- 6XQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GGGGGCCCACCAGCCUACC
- Length
- 19 nucleotides
- Bulged bases
- 6XQD|1|1A|C|888, 6XQD|1|1A|C|889, 6XQD|1|1A|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XQD|1|1A|G|879
6XQD|1|1A|G|880
6XQD|1|1A|G|881
6XQD|1|1A|G|882
6XQD|1|1A|G|883
6XQD|1|1A|C|884
6XQD|1|1A|C|885
6XQD|1|1A|C|886
6XQD|1|1A|A|887
6XQD|1|1A|C|888
6XQD|1|1A|C|889
6XQD|1|1A|A|890
6XQD|1|1A|G|892
6XQD|1|1A|C|893
6XQD|1|1A|C|894
6XQD|1|1A|U|895
6XQD|1|1A|A|896
6XQD|1|1A|C|897
6XQD|1|1A|C|898
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1Q
- 50S ribosomal protein L16
- Chain 1Z
- 50S ribosomal protein L25
- Chain 1m
- 30S ribosomal protein S13
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