HL_6XQE_121

3D structure

PDB id

6XQE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGGUUCGUGGAGCCA

Length

15 nucleotides

Bulged bases

6XQE|1|2A|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XQE|1|2A|U|380
6XQE|1|2A|G|381
6XQE|1|2A|G|382
6XQE|1|2A|U|383
6XQE|1|2A|U|384
6XQE|1|2A|C|385
6XQE|1|2A|G|386
6XQE|1|2A|U|387
6XQE|1|2A|G|388
6XQE|1|2A|G|389
6XQE|1|2A|A|390
6XQE|1|2A|G|391
6XQE|1|2A|C|392
6XQE|1|2A|C|393
6XQE|1|2A|A|394

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 21

50S ribosomal protein L28

Chain 2P

50S ribosomal protein L15