HL_6XYW_012

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

CGCGGCGUGUUCGAAUUCUG

Length

20 nucleotides

Bulged bases

6XYW|1|1|G|515, 6XYW|1|1|G|517, 6XYW|1|1|C|520

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|1|C|509
6XYW|1|1|G|510
6XYW|1|1|C|511
6XYW|1|1|G|512
6XYW|1|1|G|513
6XYW|1|1|C|514
6XYW|1|1|G|515
6XYW|1|1|U|516
6XYW|1|1|G|517
6XYW|1|1|U|518
6XYW|1|1|U|519
6XYW|1|1|C|520
6XYW|1|1|G|521
6XYW|1|1|A|522
6XYW|1|1|A|523
6XYW|1|1|U|524
6XYW|1|1|U|525
6XYW|1|1|C|526
6XYW|1|1|U|527
6XYW|1|1|G|528

Current chains

Chain 1

RNA (2842-MER)

Nearby chains

Chain AD

Ribosomal protein L35

Chain Ax

AT4g31460/F3L17_30