HL_6XYW_026
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- GAAACAGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XYW_026 not in the Motif Atlas
- Homologous match to HL_5J7L_160
- Geometric discrepancy: 0.1901
- The information below is about HL_5J7L_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_42998.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6XYW|1|1|G|1127
6XYW|1|1|A|1128
6XYW|1|1|A|1129
6XYW|1|1|A|1130
6XYW|1|1|C|1131
6XYW|1|1|A|1132
6XYW|1|1|G|1133
6XYW|1|1|C|1134
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain 3
- RNA (118-MER)
- Chain AL
- Uncharacterized protein At1g27435/F17L21.30
- Chain Aq
- 50S ribosomal protein L20
- Chain Ar
- 50S ribosomal protein L21, mitochondrial
Coloring options: