HL_6XYW_028

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

6XYW|1|1|A|1244

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6XYW_028 not in the Motif Atlas

Homologous match to HL_7RQB_030

Geometric discrepancy: 0.4575

The information below is about HL_7RQB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|1|C|1241
6XYW|1|1|G|1242
6XYW|1|1|U|1243
6XYW|1|1|A|1244
6XYW|1|1|A|1245
6XYW|1|1|U|1246
6XYW|1|1|A|1247
6XYW|1|1|G|1248

Current chains

Chain 1

RNA (2842-MER)

Nearby chains

Chain Af

Putative ribosomal protein L6

Chain Ai

At4g35490