HL_6XYW_044

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

GGUAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6XYW_044 not in the Motif Atlas

Homologous match to HL_4WF9_044

Geometric discrepancy: 0.2184

The information below is about HL_4WF9_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|1|G|2123
6XYW|1|1|G|2124
6XYW|1|1|U|2125
6XYW|1|1|A|2126
6XYW|1|1|A|2127
6XYW|1|1|C|2128

Current chains

Chain 1

RNA (2842-MER)

Nearby chains

Chain Aa

60S ribosomal protein L2, mitochondrial

Chain Ab

Expressed protein

Chain Ax

AT4g31460/F3L17_30