HL_6XYW_052
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 6XYW|1|1|A|2570, 6XYW|1|1|C|2577
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XYW_052 not in the Motif Atlas
- Homologous match to HL_4WF9_050
- Geometric discrepancy: 0.1627
- The information below is about HL_4WF9_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.1
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
6XYW|1|1|C|2566
6XYW|1|1|U|2567
6XYW|1|1|A|2568
6XYW|1|1|A|2569
6XYW|1|1|A|2570
6XYW|1|1|G|2571
6XYW|1|1|A|2572
6XYW|1|1|G|2573
6XYW|1|1|U|2574
6XYW|1|1|A|2575
6XYW|1|1|A|2576
6XYW|1|1|C|2577
6XYW|1|1|G|2578
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain Am
- 60S ribosomal protein L16, mitochondrial
- Chain Aw
- 50S ribosomal protein L27
Coloring options: