HL_6XYW_077

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

GUGCGCGAUCAUGACAGGAC

Length

20 nucleotides

Bulged bases

6XYW|1|2|G|482

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|G|466
6XYW|1|2|U|467
6XYW|1|2|G|468
6XYW|1|2|C|469
6XYW|1|2|G|470
6XYW|1|2|C|471
6XYW|1|2|G|472
6XYW|1|2|A|473
6XYW|1|2|U|474
6XYW|1|2|C|475
6XYW|1|2|A|476
6XYW|1|2|U|477
6XYW|1|2|G|478
6XYW|1|2|A|479
6XYW|1|2|C|480
6XYW|1|2|A|481
6XYW|1|2|G|482
6XYW|1|2|G|483
6XYW|1|2|A|484
6XYW|1|2|C|485

Current chains

Chain 2

RNA (1743-MER)

Nearby chains

Chain BC

At5g26800

Chain BD

Gb|AAC32909.1

Chain Bc

Ribosomal protein S4, mitochondrial

Chain Bo

30S ribosomal protein S16-2, chloroplastic/mitochondrial

Chain Bv

AT5g49210/K21P3_8