HL_6XYW_098
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CAUUCCG
- Length
- 7 nucleotides
- Bulged bases
- 6XYW|1|3|U|43
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XYW_098 not in the Motif Atlas
- Geometric match to HL_2Y9H_003
- Geometric discrepancy: 0.2076
- The information below is about HL_2Y9H_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.7
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 22
Unit IDs
6XYW|1|3|C|40
6XYW|1|3|A|41
6XYW|1|3|U|42
6XYW|1|3|U|43
6XYW|1|3|C|44
6XYW|1|3|C|45
6XYW|1|3|G|46
Current chains
- Chain 3
- RNA (118-MER)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain AA
- Ribosomal protein L31
- Chain AI
- At1g14620/T5E21_15
- Chain AR
- UNK-6
- Chain Ae
- 60S ribosomal protein L5, mitochondrial
- Chain Ao
- At5g27820
Coloring options: