3D structure

PDB id
6XYW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the plant mitochondrial ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.86 Å

Loop

Sequence
CCUUUUGCAUGAUG
Length
14 nucleotides
Bulged bases
6XYW|1|1|G|724
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6XYW|1|1|C|714
6XYW|1|1|C|715
6XYW|1|1|U|716
6XYW|1|1|U|717
6XYW|1|1|U|718
6XYW|1|1|U|719
6XYW|1|1|G|720
6XYW|1|1|C|721
6XYW|1|1|A|722
6XYW|1|1|U|723
6XYW|1|1|G|724
6XYW|1|1|A|725
6XYW|1|1|U|726
6XYW|1|1|G|727

Current chains

Chain 1
RNA (2842-MER)

Nearby chains

Chain Ac
50S ribosomal protein L3-2, mitochondrial
Chain Ad
50S ribosomal protein L4
Chain Al
Ribosomal protein L18e/L15 superfamily protein
Chain Aq
50S ribosomal protein L20
Chain Ar
50S ribosomal protein L21, mitochondrial

Coloring options:

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