HL_6XZ7_026
3D structure
- PDB id
- 6XZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- G(PSU)GCUAACGU
- Length
- 10 nucleotides
- Bulged bases
- 6XZ7|1|A|U|958, 6XZ7|1|A|C|961
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XZ7_026 not in the Motif Atlas
- Homologous match to HL_5J7L_159
- Geometric discrepancy: 0.0635
- The information below is about HL_5J7L_159
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XZ7|1|A|G|954
6XZ7|1|A|PSU|955
6XZ7|1|A|G|956
6XZ7|1|A|C|957
6XZ7|1|A|U|958
6XZ7|1|A|A|959
6XZ7|1|A|A|960
6XZ7|1|A|C|961
6XZ7|1|A|G|962
6XZ7|1|A|U|963
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
Coloring options: