HL_6XZ7_067

3D structure

PDB id

6XZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

6XZ7|1|A|U|2797, 6XZ7|1|A|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6XZ7_067 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.2079

The information below is about HL_5J7L_200

Detailed Annotation

Other HL

Broad Annotation

Other HL

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

6XZ7|1|A|C|2795
6XZ7|1|A|U|2796
6XZ7|1|A|U|2797
6XZ7|1|A|U|2798
6XZ7|1|A|A|2799
6XZ7|1|A|A|2800
6XZ7|1|A|G|2801

Current chains

Chain A

23S rRNA

Nearby chains