HL_6XZB_036

3D structure

PDB id

6XZB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

6XZB|1|A2|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6XZB_036 not in the Motif Atlas

Geometric match to HL_4AY2_001

Geometric discrepancy: 0.2722

The information below is about HL_4AY2_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6XZB|1|A2|U|137
6XZB|1|A2|U|138
6XZB|1|A2|U|139
6XZB|1|A2|C|140
6XZB|1|A2|G|141
6XZB|1|A2|A|142

Current chains

Chain A2

23S rRNA

Nearby chains

Chain T2

50S ribosomal protein L23