HL_6XZB_057

3D structure

PDB id

6XZB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GGGGUCACUUAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XZB|1|A2|G|880
6XZB|1|A2|G|881
6XZB|1|A2|G|882
6XZB|1|A2|G|883
6XZB|1|A2|U|884
6XZB|1|A2|C|885
6XZB|1|A2|A|892
6XZB|1|A2|C|893
6XZB|1|A2|U|894
6XZB|1|A2|U|895
6XZB|1|A2|A|896
6XZB|1|A2|C|897

Current chains

Chain A2

23S rRNA

Nearby chains

Chain S1

30S ribosomal protein S19

Chain g2

Transfer RNA; tRNA