HL_6Y0G_033

3D structure

PDB id

6Y0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in classical-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGCCGAAAGAUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y0G|1|L5|G|1760
6Y0G|1|L5|G|1761
6Y0G|1|L5|C|1762
6Y0G|1|L5|C|1763
6Y0G|1|L5|G|1764
6Y0G|1|L5|A|1765
6Y0G|1|L5|A|1766
6Y0G|1|L5|A|1767
6Y0G|1|L5|G|1769
6Y0G|1|L5|A|1770
6Y0G|1|L5|U|1771
6Y0G|1|L5|C|1772

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LJ

60S ribosomal protein L11

Chain SP

40S ribosomal protein S15

Chain SS

40S ribosomal protein S18