Loop HL_6Y0G

3D structure

PDB id: 6Y0G (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of human ribosome in classical-PRE state
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

Loop

Sequence: UAUAGACAGCAGGACGGUGGCAAGUCGCUAAGGAGGUGUAACAACUCACCUGCCGAA
Length: 57 nucleotides
Bulged bases: 6Y0G|1|L5|A|1960, 6Y0G|1|L5|G|1975, 6Y0G|1|L5|A|1983, 6Y0G|1|L5|A|1984, 6Y0G|1|L5|U|1997, 6Y0G|1|L5|A|2009, 6Y0G|1|L5|C|2011
QA status: Missing nucleotides

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6Y0G|1|L5|U|1957
6Y0G|1|L5|A|1958
6Y0G|1|L5|U|1959
6Y0G|1|L5|A|1960
6Y0G|1|L5|G|1961
6Y0G|1|L5|A|1962
6Y0G|1|L5|C|1963
6Y0G|1|L5|A|1964
6Y0G|1|L5|G|1965
6Y0G|1|L5|C|1966
6Y0G|1|L5|A|1967
6Y0G|1|L5|G|1968
6Y0G|1|L5|G|1969
6Y0G|1|L5|A|1970
6Y0G|1|L5|C|1971
6Y0G|1|L5|G|1972
6Y0G|1|L5|G|1973
6Y0G|1|L5|U|1974
6Y0G|1|L5|G|1975
6Y0G|1|L5|G|1976
6Y0G|1|L5|C|1977
6Y0G|1|L5|A|1983
6Y0G|1|L5|A|1984
6Y0G|1|L5|G|1985
6Y0G|1|L5|U|1986
6Y0G|1|L5|C|1994
6Y0G|1|L5|G|1995
6Y0G|1|L5|C|1996
6Y0G|1|L5|U|1997
6Y0G|1|L5|A|1998
6Y0G|1|L5|A|1999
6Y0G|1|L5|G|2000
6Y0G|1|L5|G|2001
6Y0G|1|L5|A|2002
6Y0G|1|L5|G|2003
6Y0G|1|L5|G|2005
6Y0G|1|L5|U|2006
6Y0G|1|L5|G|2007
6Y0G|1|L5|U|2008
6Y0G|1|L5|A|2009
6Y0G|1|L5|A|2010
6Y0G|1|L5|C|2011
6Y0G|1|L5|A|2012
6Y0G|1|L5|A|2013
6Y0G|1|L5|C|2014
6Y0G|1|L5|U|2015
6Y0G|1|L5|C|2016
6Y0G|1|L5|A|2017
6Y0G|1|L5|C|2018
6Y0G|1|L5|C|2019
6Y0G|1|L5|U|2020
6Y0G|1|L5|G|2021
6Y0G|1|L5|C|2022
6Y0G|1|L5|C|2023
6Y0G|1|L5|G|2024
6Y0G|1|L5|A|2025
6Y0G|1|L5|A|2026

Current chains

Chain L5: 28S ribosomal RNA

Nearby chains

Chain LS: 60S ribosomal protein L18a
Chain Lm: Ubiquitin-60S ribosomal protein L40

HL_6Y0G_037