HL_6Y0G_100

3D structure

PDB id

6Y0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in classical-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GACUCUUUCGAGGC

Length

14 nucleotides

Bulged bases

6Y0G|1|S2|C|539

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y0G|1|S2|G|535
6Y0G|1|S2|A|536
6Y0G|1|S2|C|537
6Y0G|1|S2|U|538
6Y0G|1|S2|C|539
6Y0G|1|S2|U|540
6Y0G|1|S2|U|541
6Y0G|1|S2|U|542
6Y0G|1|S2|C|543
6Y0G|1|S2|G|544
6Y0G|1|S2|A|545
6Y0G|1|S2|G|546
6Y0G|1|S2|G|547
6Y0G|1|S2|C|548

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain Se

40S ribosomal protein S30