HL_6Y2L_034

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCAGGACGGUGGCGCUAACCUGC

Length

23 nucleotides

Bulged bases

6Y2L|1|L5|G|1975, 6Y2L|1|L5|G|1976, 6Y2L|1|L5|U|1997

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y2L|1|L5|G|1965
6Y2L|1|L5|C|1966
6Y2L|1|L5|A|1967
6Y2L|1|L5|G|1968
6Y2L|1|L5|G|1969
6Y2L|1|L5|A|1970
6Y2L|1|L5|C|1971
6Y2L|1|L5|G|1972
6Y2L|1|L5|G|1973
6Y2L|1|L5|U|1974
6Y2L|1|L5|G|1975
6Y2L|1|L5|G|1976
6Y2L|1|L5|C|1994
6Y2L|1|L5|G|1995
6Y2L|1|L5|C|1996
6Y2L|1|L5|U|1997
6Y2L|1|L5|A|1998
6Y2L|1|L5|A|2017
6Y2L|1|L5|C|2018
6Y2L|1|L5|C|2019
6Y2L|1|L5|U|2020
6Y2L|1|L5|G|2021
6Y2L|1|L5|C|2022

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain Lm

Ubiquitin-60S ribosomal protein L40