HL_6Y2L_074

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

6Y2L|1|L5|G|4694, 6Y2L|1|L5|C|4698

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Y2L_074 not in the Motif Atlas

Homologous match to HL_8C3A_068

Geometric discrepancy: 0.0879

The information below is about HL_8C3A_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.9

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

6Y2L|1|L5|C|4688
6Y2L|1|L5|U|4689
6Y2L|1|L5|G|4690
6Y2L|1|L5|A|4691
6Y2L|1|L5|A|4692
6Y2L|1|L5|C|4693
6Y2L|1|L5|G|4694
6Y2L|1|L5|C|4695
6Y2L|1|L5|C|4696
6Y2L|1|L5|U|4697
6Y2L|1|L5|C|4698
6Y2L|1|L5|U|4699
6Y2L|1|L5|A|4700
6Y2L|1|L5|A|4701
6Y2L|1|L5|G|4702

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LH

60S ribosomal protein L9

Chain LO

60S ribosomal protein L13a

Chain Lm

Ubiquitin-60S ribosomal protein L40