HL_6Y2L_089

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUGACUC

Length

8 nucleotides

Bulged bases

6Y2L|1|S2|U|294

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Y2L_089 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.1641

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

6Y2L|1|S2|G|288
6Y2L|1|S2|G|289
6Y2L|1|S2|U|290
6Y2L|1|S2|G|291
6Y2L|1|S2|A|292
6Y2L|1|S2|C|293
6Y2L|1|S2|U|294
6Y2L|1|S2|C|295

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SG

40S ribosomal protein S6

Chain SL

40S ribosomal protein S11