HL_6Y2L_119

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGCGGACUGUCCCCAGUGCGCC

Length

22 nucleotides

Bulged bases

6Y2L|1|L5|G|1178, 6Y2L|1|L5|U|1179, 6Y2L|1|L5|C|1181, 6Y2L|1|L5|C|1182

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y2L|1|L5|G|1170
6Y2L|1|L5|G|1171
6Y2L|1|L5|C|1172
6Y2L|1|L5|G|1173
6Y2L|1|L5|G|1174
6Y2L|1|L5|A|1175
6Y2L|1|L5|C|1176
6Y2L|1|L5|U|1177
6Y2L|1|L5|G|1178
6Y2L|1|L5|U|1179
6Y2L|1|L5|C|1180
6Y2L|1|L5|C|1181
6Y2L|1|L5|C|1182
6Y2L|1|L5|C|1183
6Y2L|1|L5|A|1184
6Y2L|1|L5|G|1185
6Y2L|1|L5|U|1186
6Y2L|1|L5|G|1187
6Y2L|1|L5|C|1188
6Y2L|1|L5|G|1189
6Y2L|1|L5|C|1190
6Y2L|1|L5|C|1191

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LI

60S ribosomal protein L10-like