HL_6Y57_002
3D structure
- PDB id
- 6Y57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome in hybrid-PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GCCCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Y57_002 not in the Motif Atlas
- Homologous match to HL_6UFG_007
- Geometric discrepancy: 0.1549
- The information below is about HL_6UFG_007
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 42
Unit IDs
6Y57|1|B4|G|30
6Y57|1|B4|C|31
6Y57|1|B4|C|32
6Y57|1|B4|C|33
6Y57|1|B4|A|34
6Y57|1|B4|U|35
6Y57|1|B4|A|36
6Y57|1|B4|A|37
6Y57|1|B4|C|38
Current chains
- Chain B4
- P/E tRNA
Nearby chains
- Chain A4
- mRNA
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SP
- 40S ribosomal protein S15
- Chain SQ
- 40S ribosomal protein S16
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