HL_6Y57_018

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCUUUCCCGCGCGGGGGA

Length

18 nucleotides

Bulged bases

6Y57|1|L5|U|514, 6Y57|1|L5|C|517

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|L5|U|510
6Y57|1|L5|C|511
6Y57|1|L5|U|512
6Y57|1|L5|U|513
6Y57|1|L5|U|514
6Y57|1|L5|C|515
6Y57|1|L5|C|516
6Y57|1|L5|C|517
6Y57|1|L5|G|518
6Y57|1|L5|C|519
6Y57|1|L5|G|642
6Y57|1|L5|C|643
6Y57|1|L5|G|644
6Y57|1|L5|G|645
6Y57|1|L5|G|646
6Y57|1|L5|G|647
6Y57|1|L5|G|648
6Y57|1|L5|A|649

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain La

60S ribosomal protein L27a