HL_6Y57_026

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGCGCGCUCGCC

Length

12 nucleotides

Bulged bases

6Y57|1|L5|G|1408, 6Y57|1|L5|U|1410, 6Y57|1|L5|C|1411

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|L5|G|1403
6Y57|1|L5|G|1404
6Y57|1|L5|C|1405
6Y57|1|L5|G|1406
6Y57|1|L5|C|1407
6Y57|1|L5|G|1408
6Y57|1|L5|C|1409
6Y57|1|L5|U|1410
6Y57|1|L5|C|1411
6Y57|1|L5|G|1412
6Y57|1|L5|C|1413
6Y57|1|L5|C|1414

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain La

60S ribosomal protein L27a

Chain Lb

60S ribosomal protein L29