HL_6Y57_037

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCAGGACCCGCUAAGCACCUGC

Length

22 nucleotides

Bulged bases

6Y57|1|L5|C|1971, 6Y57|1|L5|U|1997, 6Y57|1|L5|A|1998

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|L5|G|1965
6Y57|1|L5|C|1966
6Y57|1|L5|A|1967
6Y57|1|L5|G|1968
6Y57|1|L5|G|1969
6Y57|1|L5|A|1970
6Y57|1|L5|C|1971
6Y57|1|L5|C|1993
6Y57|1|L5|C|1994
6Y57|1|L5|G|1995
6Y57|1|L5|C|1996
6Y57|1|L5|U|1997
6Y57|1|L5|A|1998
6Y57|1|L5|A|1999
6Y57|1|L5|G|2000
6Y57|1|L5|C|2016
6Y57|1|L5|A|2017
6Y57|1|L5|C|2018
6Y57|1|L5|C|2019
6Y57|1|L5|U|2020
6Y57|1|L5|G|2021
6Y57|1|L5|C|2022

Current chains

Chain L5

28S ribosomal RNA

Nearby chains