HL_6Y57_043

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

ACGGGCGACCGUUGCCCU

Length

18 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|L5|A|2477
6Y57|1|L5|C|2478
6Y57|1|L5|G|2479
6Y57|1|L5|G|2480
6Y57|1|L5|G|2481
6Y57|1|L5|C|2482
6Y57|1|L5|G|2483
6Y57|1|L5|A|2484
6Y57|1|L5|C|2491
6Y57|1|L5|C|2492
6Y57|1|L5|G|2493
6Y57|1|L5|U|2494
6Y57|1|L5|U|2495
6Y57|1|L5|G|2496
6Y57|1|L5|C|2497
6Y57|1|L5|C|2498
6Y57|1|L5|C|2499
6Y57|1|L5|U|2500

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LX

60S ribosomal protein L23a