HL_6Y57_062

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGAAGAGAUUUUUCAC

Length

17 nucleotides

Bulged bases

6Y57|1|L5|A|3947, 6Y57|1|L5|U|4070

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|L5|G|3939
6Y57|1|L5|U|3940
6Y57|1|L5|G|3941
6Y57|1|L5|A|3942
6Y57|1|L5|A|3943
6Y57|1|L5|G|3944
6Y57|1|L5|A|3945
6Y57|1|L5|G|3946
6Y57|1|L5|A|3947
6Y57|1|L5|U|4067
6Y57|1|L5|U|4068
6Y57|1|L5|U|4069
6Y57|1|L5|U|4070
6Y57|1|L5|U|4071
6Y57|1|L5|C|4072
6Y57|1|L5|A|4073
6Y57|1|L5|C|4074

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LG

60S ribosomal protein L7a

Chain LN

60S ribosomal protein L15

Chain Li

60S ribosomal protein L36

Chain SB

40S ribosomal protein S3a