HL_6Y57_122
3D structure
- PDB id
- 6Y57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome in hybrid-PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAGCGGAAG
- Length
- 9 nucleotides
- Bulged bases
- 6Y57|1|B4|G|17, 6Y57|1|B4|G|18, 6Y57|1|B4|A|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Y57_122 not in the Motif Atlas
- Homologous match to HL_6JXM_001
- Geometric discrepancy: 0.3046
- The information below is about HL_6JXM_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20811.4
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 14
Unit IDs
6Y57|1|B4|C|13
6Y57|1|B4|A|14
6Y57|1|B4|G|15
6Y57|1|B4|C|16
6Y57|1|B4|G|17
6Y57|1|B4|G|18
6Y57|1|B4|A|19
6Y57|1|B4|A|20
6Y57|1|B4|G|21
Current chains
- Chain B4
- P/E tRNA
Nearby chains
No other chains within 10ÅColoring options: