HL_6Y57_125

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAGGUGAAAUUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|S2|G|956
6Y57|1|S2|A|957
6Y57|1|S2|G|958
6Y57|1|S2|G|959
6Y57|1|S2|U|960
6Y57|1|S2|G|961
6Y57|1|S2|A|962
6Y57|1|S2|A|963
6Y57|1|S2|A|964
6Y57|1|S2|U|965
6Y57|1|S2|U|966
6Y57|1|S2|C|967

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain A4

mRNA

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain SO

40S ribosomal protein S14

Chain Sa

40S ribosomal protein S26