HL_6Y69_027

3D structure

PDB id

6Y69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UGUUGGCUUAGAAGCAGCCAUCA

Length

23 nucleotides

Bulged bases

6Y69|1|A|U|1061, 6Y69|1|A|C|1064, 6Y69|1|A|U|1066, 6Y69|1|A|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y69|1|A|U|1058
6Y69|1|A|G|1059
6Y69|1|A|U|1060
6Y69|1|A|U|1061
6Y69|1|A|G|1062
6Y69|1|A|G|1063
6Y69|1|A|C|1064
6Y69|1|A|U|1065
6Y69|1|A|U|1066
6Y69|1|A|A|1067
6Y69|1|A|G|1068
6Y69|1|A|A|1069
6Y69|1|A|A|1070
6Y69|1|A|G|1071
6Y69|1|A|C|1072
6Y69|1|A|A|1073
6Y69|1|A|G|1074
6Y69|1|A|C|1075
6Y69|1|A|C|1076
6Y69|1|A|A|1077
6Y69|1|A|U|1078
6Y69|1|A|C|1079
6Y69|1|A|A|1080

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L16