HL_6Y6X_030

3D structure

PDB id

6Y6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracenomycin X bound to the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUGUAACAAC

Length

10 nucleotides

Bulged bases

6Y6X|1|L5|C|2011

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y6X|1|L5|G|2005
6Y6X|1|L5|U|2006
6Y6X|1|L5|G|2007
6Y6X|1|L5|U|2008
6Y6X|1|L5|A|2009
6Y6X|1|L5|A|2010
6Y6X|1|L5|C|2011
6Y6X|1|L5|A|2012
6Y6X|1|L5|A|2013
6Y6X|1|L5|C|2014

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain Lm

Ubiquitin-60S ribosomal protein L40