HL_6Y6X_076
3D structure
- PDB id
- 6Y6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracenomycin X bound to the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGUCUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Y6X_076 not in the Motif Atlas
- Homologous match to HL_5TBW_185
- Geometric discrepancy: 0.1185
- The information below is about HL_5TBW_185
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_83767.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 8
Unit IDs
6Y6X|1|L7|C|36
6Y6X|1|L7|G|37
6Y6X|1|L7|U|38
6Y6X|1|L7|C|39
6Y6X|1|L7|U|40
6Y6X|1|L7|G|41
Current chains
- Chain L7
- 5S ribosomal RNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LD
- 60S ribosomal protein L5
- Chain LJ
- 60S ribosomal protein L11
Coloring options: