HL_6Y6X_084
3D structure
- PDB id
- 6Y6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracenomycin X bound to the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GACAUGAGAGGUGUAGAAUAAGUGGGAGGCCCCCGGCGCCCCCCCGGUGUCCCCGCGAGGGGCCCGGGGCGGGGUCCGCCGGCCCUGCGGGCCGCCGGUGAAAUACCACUACUCUGAUCGUU
- Length
- 122 nucleotides
- Bulged bases
- 6Y6X|1|L5|A|3947, 6Y6X|1|L5|A|3962, 6Y6X|1|L5|G|3969, 6Y6X|1|L5|C|3976, 6Y6X|1|L5|C|3977, 6Y6X|1|L5|C|3978, 6Y6X|1|L5|C|3979, 6Y6X|1|L5|G|3980, 6Y6X|1|L5|G|3981, 6Y6X|1|L5|C|3982, 6Y6X|1|L5|G|3983, 6Y6X|1|L5|C|3984, 6Y6X|1|L5|C|3985, 6Y6X|1|L5|C|3986, 6Y6X|1|L5|C|3987, 6Y6X|1|L5|C|3988, 6Y6X|1|L5|C|3989, 6Y6X|1|L5|C|3990, 6Y6X|1|L5|G|3991, 6Y6X|1|L5|G|3992, 6Y6X|1|L5|U|3993, 6Y6X|1|L5|G|3994, 6Y6X|1|L5|U|3995, 6Y6X|1|L5|C|3996, 6Y6X|1|L5|C|3997, 6Y6X|1|L5|C|3998, 6Y6X|1|L5|C|3999, 6Y6X|1|L5|G|4000, 6Y6X|1|L5|C|4001, 6Y6X|1|L5|G|4002, 6Y6X|1|L5|A|4003, 6Y6X|1|L5|G|4004, 6Y6X|1|L5|G|4005, 6Y6X|1|L5|G|4006, 6Y6X|1|L5|G|4007, 6Y6X|1|L5|C|4008, 6Y6X|1|L5|C|4009, 6Y6X|1|L5|C|4010, 6Y6X|1|L5|G|4011, 6Y6X|1|L5|G|4012, 6Y6X|1|L5|G|4013, 6Y6X|1|L5|G|4014, 6Y6X|1|L5|C|4015, 6Y6X|1|L5|G|4016, 6Y6X|1|L5|G|4017, 6Y6X|1|L5|G|4018, 6Y6X|1|L5|G|4019, 6Y6X|1|L5|U|4020, 6Y6X|1|L5|C|4021, 6Y6X|1|L5|C|4022, 6Y6X|1|L5|G|4023, 6Y6X|1|L5|C|4024, 6Y6X|1|L5|C|4025, 6Y6X|1|L5|G|4026, 6Y6X|1|L5|G|4027, 6Y6X|1|L5|C|4028, 6Y6X|1|L5|C|4029, 6Y6X|1|L5|C|4030, 6Y6X|1|L5|U|4031, 6Y6X|1|L5|G|4032, 6Y6X|1|L5|C|4033, 6Y6X|1|L5|G|4034, 6Y6X|1|L5|G|4035, 6Y6X|1|L5|C|4038, 6Y6X|1|L5|G|4039, 6Y6X|1|L5|G|4042, 6Y6X|1|L5|U|4044, 6Y6X|1|L5|A|4047, 6Y6X|1|L5|C|4051, 6Y6X|1|L5|C|4052, 6Y6X|1|L5|A|4053, 6Y6X|1|L5|C|4054, 6Y6X|1|L5|U|4058, 6Y6X|1|L5|C|4059
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Y6X|1|L5|G|3946
6Y6X|1|L5|A|3947
6Y6X|1|L5|C|3948
6Y6X|1|L5|A|3949
6Y6X|1|L5|U|3950
6Y6X|1|L5|G|3951
6Y6X|1|L5|A|3952
6Y6X|1|L5|G|3953
6Y6X|1|L5|A|3954
6Y6X|1|L5|G|3955
6Y6X|1|L5|G|3956
6Y6X|1|L5|U|3957
6Y6X|1|L5|G|3958
6Y6X|1|L5|U|3959
6Y6X|1|L5|A|3960
6Y6X|1|L5|G|3961
6Y6X|1|L5|A|3962
6Y6X|1|L5|A|3963
6Y6X|1|L5|U|3964
6Y6X|1|L5|A|3965
6Y6X|1|L5|A|3966
6Y6X|1|L5|G|3967
6Y6X|1|L5|U|3968
6Y6X|1|L5|G|3969
6Y6X|1|L5|G|3970
6Y6X|1|L5|G|3971
6Y6X|1|L5|A|3972
6Y6X|1|L5|G|3973
6Y6X|1|L5|G|3974
6Y6X|1|L5|C|3975
6Y6X|1|L5|C|3976
6Y6X|1|L5|C|3977
6Y6X|1|L5|C|3978
6Y6X|1|L5|C|3979
6Y6X|1|L5|G|3980
6Y6X|1|L5|G|3981
6Y6X|1|L5|C|3982
6Y6X|1|L5|G|3983
6Y6X|1|L5|C|3984
6Y6X|1|L5|C|3985
6Y6X|1|L5|C|3986
6Y6X|1|L5|C|3987
6Y6X|1|L5|C|3988
6Y6X|1|L5|C|3989
6Y6X|1|L5|C|3990
6Y6X|1|L5|G|3991
6Y6X|1|L5|G|3992
6Y6X|1|L5|U|3993
6Y6X|1|L5|G|3994
6Y6X|1|L5|U|3995
6Y6X|1|L5|C|3996
6Y6X|1|L5|C|3997
6Y6X|1|L5|C|3998
6Y6X|1|L5|C|3999
6Y6X|1|L5|G|4000
6Y6X|1|L5|C|4001
6Y6X|1|L5|G|4002
6Y6X|1|L5|A|4003
6Y6X|1|L5|G|4004
6Y6X|1|L5|G|4005
6Y6X|1|L5|G|4006
6Y6X|1|L5|G|4007
6Y6X|1|L5|C|4008
6Y6X|1|L5|C|4009
6Y6X|1|L5|C|4010
6Y6X|1|L5|G|4011
6Y6X|1|L5|G|4012
6Y6X|1|L5|G|4013
6Y6X|1|L5|G|4014
6Y6X|1|L5|C|4015
6Y6X|1|L5|G|4016
6Y6X|1|L5|G|4017
6Y6X|1|L5|G|4018
6Y6X|1|L5|G|4019
6Y6X|1|L5|U|4020
6Y6X|1|L5|C|4021
6Y6X|1|L5|C|4022
6Y6X|1|L5|G|4023
6Y6X|1|L5|C|4024
6Y6X|1|L5|C|4025
6Y6X|1|L5|G|4026
6Y6X|1|L5|G|4027
6Y6X|1|L5|C|4028
6Y6X|1|L5|C|4029
6Y6X|1|L5|C|4030
6Y6X|1|L5|U|4031
6Y6X|1|L5|G|4032
6Y6X|1|L5|C|4033
6Y6X|1|L5|G|4034
6Y6X|1|L5|G|4035
6Y6X|1|L5|G|4036
6Y6X|1|L5|C|4037
6Y6X|1|L5|C|4038
6Y6X|1|L5|G|4039
6Y6X|1|L5|C|4040
6Y6X|1|L5|C|4041
6Y6X|1|L5|G|4042
6Y6X|1|L5|G|4043
6Y6X|1|L5|U|4044
6Y6X|1|L5|G|4045
6Y6X|1|L5|A|4046
6Y6X|1|L5|A|4047
6Y6X|1|L5|A|4048
6Y6X|1|L5|U|4049
6Y6X|1|L5|A|4050
6Y6X|1|L5|C|4051
6Y6X|1|L5|C|4052
6Y6X|1|L5|A|4053
6Y6X|1|L5|C|4054
6Y6X|1|L5|U|4055
6Y6X|1|L5|A|4056
6Y6X|1|L5|C|4057
6Y6X|1|L5|U|4058
6Y6X|1|L5|C|4059
6Y6X|1|L5|U|4060
6Y6X|1|L5|G|4061
6Y6X|1|L5|A|4062
6Y6X|1|L5|U|4063
6Y6X|1|L5|C|4064
6Y6X|1|L5|G|4065
6Y6X|1|L5|U|4066
6Y6X|1|L5|U|4067
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain Li
- 60S ribosomal protein L36
- Chain Lz
- 60S ribosomal protein L10a
Coloring options: