HL_6YAL_019

3D structure

PDB id

6YAL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 48S late-stage initiation complex with beta-globin mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAGGGUUCCCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YAL|1|2|G|682
6YAL|1|2|G|683
6YAL|1|2|A|684
6YAL|1|2|G|685
6YAL|1|2|G|686
6YAL|1|2|G|687
6YAL|1|2|U|688
6YAL|1|2|U|728
6YAL|1|2|C|729
6YAL|1|2|C|730
6YAL|1|2|C|731
6YAL|1|2|C|732

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain J

40S ribosomal protein eS7

Chain Y

40S ribosomal protein uS8